Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887861.1_cds_XP_016442357.1_37629
CDS Infomation

[gene=LOC107767781] [db_xref=GeneID:107767781] [protein=putative late blight resistance protein homolog R1B-14] [protein_id=XP_016442357.1] [location=join(44739..44762,44956..46428)] [gbkey=CDS]
Sequence

ATGGCTGTCAGTGACTTGACAAACATAATACGTGAATTCATTTTAAAAGGAGGTAAATGT
CTCATTGTGTTGGACGATGTGTGGGCGACAGACGTTGTGGATTCTGTGATGAAAGTTTTC
CCGGAAATCAGCAATGGCCATCGAATCATGTTCACCACTCGTGACTTGCGTATTGGTAGA
TATGCCAATCCTGATCCTCACTCATTGAAATTTCTGACGGACAAGGAAAGTTTCCAACTG
TTGGAAAAAAGAGTTTTTGGCAGTAATATTAGAAAGTGCCCTGAAGATTTAATAGCACAT
GGAGAAAGTATTGCTAACCAATGTAGTGGATTGCCACTTGCTGTAGTGGTAATTGCAGGA
GCTCTAAAAGGACGTACAAGCGAAAGAGTGTGGCAAATGGTTAAGGACAATGTAGGAAAA
CACCTTATAAATAAGGATGACCCACAAAGCTGCTTGAAATATGTTGAAATGAGTTATGGT
CATCTGCCCGAAGATATGAAGGCGTGCTTCCTGTATTGTGGCGCCTTTCCACAAGGCTTT
GAAATTCCTGCTTGGAAGTTGATACGCTTGTGGATTTCCGAGGGACTTATAAACTCCAAC
TTAGATGGAAGACCCGAGGATATAGAAGAGATTTACTTGAACGAACTTGTCAACAGGAAT
TTAGTGATTGTAATGCAGAAAAGGGTAGATGGTCAAGTAAAAACATGTCGTCTTCATGAC
ATGTTGCACCAGTTCTGCAAGATGGAAAATGGAGGTCTTTTCAAAGAAGTATGTGAAAAG
ACTGATCAGCCTGGTACTCTTATTATACCAGATCTAGATACTTCTCGTCGTTTGTGTATT
CAACTCTCTCTTTTGAGAGCTTTTATATCCAAAGGACCATCTGCTGAACATGTTACGTCT
TTCTTATGTTTTTCCACAAAACAAAAAGAAAGTGAGCAACTGGGCAATATCCGACTCCTC
CACAAAGCATTTCCACTAGTTAGGGTCTTGGATGTTGAATCCCTCAAATTTACTTTCTCA
AAGGATTTTCAAGAGCGATTTCATTTGAGGTACATAGCTATCTCAGGTGACTACAATGCT
CTTCCGGCGTTCTTTGGTAAGTTTTGGAATTTACAAACTCTTATTCTTAATACAAAAGCG
TCCACCATTGAAATAAAAGCAGACATATGGAACATGCTACGGTTGAGGCATCTGCACACC
AATGTCCCTGCGAAATTGCCCCCTGCTACCCAAACAACAGATGAATCTTCATGCCTACAA
ACTCTGTCTAAAGTTGCACCAGGAAGCTGCAGAGAAGATGTGCTTGCAAGGGCTTGTAAT
CTCAGAAAAGTGAGTATTCAAGGGGAAATGGCTGATTTTCTTGAAATTAACAAGGGTGGG
TTCAACAACTTTCGAAAACTAAAGTGCCTGGAACAATTGAAGCTGTTGAATGATGTTGGC
AGCTCCATGAGCAAAATTCTTCAACTTCCTCCAGCATTTGTCGAGTTCCTACGCTAA

Peptide Sequence

PEP ID

XP_016442357.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1B-14 [Nicotiana tabacum]
Sequence

MAVSDLTNIIREFILKGGKCLIVLDDVWATDVVDSVMKVFPEISNGHRIMFTTRDLRIGR
YANPDPHSLKFLTDKESFQLLEKRVFGSNIRKCPEDLIAHGESIANQCSGLPLAVVVIAG
ALKGRTSERVWQMVKDNVGKHLINKDDPQSCLKYVEMSYGHLPEDMKACFLYCGAFPQGF
EIPAWKLIRLWISEGLINSNLDGRPEDIEEIYLNELVNRNLVIVMQKRVDGQVKTCRLHD
MLHQFCKMENGGLFKEVCEKTDQPGTLIIPDLDTSRRLCIQLSLLRAFISKGPSAEHVTS
FLCFSTKQKESEQLGNIRLLHKAFPLVRVLDVESLKFTFSKDFQERFHLRYIAISGDYNA
LPAFFGKFWNLQTLILNTKASTIEIKADIWNMLRLRHLHTNVPAKLPPATQTTDESSCLQ
TLSKVAPGSCREDVLARACNLRKVSIQGEMADFLEINKGGFNNFRKLKCLEQLKLLNDVG
SSMSKILQLPPAFVEFLR

Transcript Sequence

Gene sequence data has not been registered.